toAnalysisSoftware {rmzqc}

From an ID, e.g. "MS:1003162" (for PTX-QC), and some additional information, create an 'analysisSoftware' node for mzQC

Description

From an ID, e.g. "MS:1003162" (for PTX-QC), and some additional information, create an 'analysisSoftware' node for mzQC

Usage

toAnalysisSoftware(id, version = "unknown", uri = NULL, value = NA_character_)

Arguments

id

The CV accession

version

The version of the tool which created the metric/mzQC

uri

URI to the homepage, or if NULL (default), will be extracted from the definition in the PSI MS-CV (if possible)

value

An optional name for the software (if different from the CV's name)

Value

An MzQCanalysisSoftware object

Examples

 # use 'version = packageVersion("PTXQC")' if the package is installed
 toAnalysisSoftware(id = "MS:1003162", version = "1.0.12")