add_clicks |
Add clicks to subdistribution curves for reconstructing CIC |
CIC_reconstruct |
Reconstruct cumulative incidence curves |
format_raw_tabs |
Format raw survival and NAR tables so they are ready for reconstruction algorithm |
integrate_survdat |
Integrate area under curve for single arm |
KM_reconstruct |
Reconstruct digitized Kaplan-Meier curves and generate invididual patient data |
nonparam_rmst |
Calculate RMST for each arm as well as contrast |
pbo_clicks |
Pembrolizumab example OS KM reconstruction clicks - placebo arm |
pbo_NAR |
Pembrolizumab example OS NAR table - placebo arm |
pembro_clicks |
Pembrolizumab example OS KM reconstruction clicks - pembrolizumab arm |
pembro_NAR |
Pembrolizumab example OS NAR table - pembrolizumab arm |
print_cox_outputs |
Print outputs from Cox regression |
remove_clicks |
Remove clicks from subdistribution curves for reconstructing CIC |
weibull_rmst |
RMST using Weibull fit |
weimle1 |
Fit Weibull distribution parameters using MLE |