subtree {rbiom} | R Documentation |
Create a subtree by specifying tips to keep.
Description
Create a subtree by specifying tips to keep.
Usage
subtree(tree, tips)
Arguments
tree |
A phylo object, as returned from read.tree. |
tips |
A character, numeric, or logical vector of tips to keep. |
Value
A phylo
object for the subtree.
Examples
library(rbiom)
infile <- system.file("extdata", "newick.tre", package = "rbiom")
tree <- read.tree(infile)
leafs <- tips(tree)
subtree <- subtree(tree, head(leafs))
[Package rbiom version 1.0.3 Index]