R: Parse a fasta file into a named character vector.

read.fasta {rbiom}

R Documentation

Parse a fasta file into a named character vector.

Parse a fasta file into a named character vector.

read.fasta(file, ids = NULL)

`file`	A file with fasta-formatted sequences. Can optionally be compressed with gzip, bzip2, xz, or lzma.
`ids`	Character vector of IDs to retrieve. The default, `NULL`, will retrieve everything.

A named character vector in which names are the fasta headers and values are the sequences.

[Package rbiom version 1.0.3 Index]