rba_jaspar_matrix_versions {rbioapi}R Documentation

List matrix profile versions associated with a base ID

Description

Since JASPAR release 2010, the matrix profiles are versioned; So, a matrix profile Identifier has "base_id.version" naming schema. Using this function you can retrieve a list of matrix profiles associated with a base (stable) ID.

Usage

rba_jaspar_matrix_versions(base_id, order = NULL, ...)

Arguments

base_id

Character: A base (stable) Identifier. A matrix profile identifier has "base_id.version" naming schema

order

Character: A character string or a vector of character strings of field names that will be used to order the results.
Providing multiple field names is supported. You can also use prefix "-" before a field name to indicate reverse ordering.

...

rbioapi option(s). See rba_options's arguments manual for more information on available options.

Value

A data frame of matrix profiles' versions information.

Corresponding API Resources

"GET https://jaspar.elixir.no/api/v1/matrix/{base_id}/versions/"

References

See Also

Other "JASPAR": rba_jaspar_collections(), rba_jaspar_collections_matrices(), rba_jaspar_matrix(), rba_jaspar_matrix_search(), rba_jaspar_releases(), rba_jaspar_sites(), rba_jaspar_species(), rba_jaspar_species_matrices(), rba_jaspar_taxons(), rba_jaspar_taxons_matrices(), rba_jaspar_tffm(), rba_jaspar_tffm_search()

Examples


rba_jaspar_matrix_versions("MA0600")



[Package rbioapi version 0.8.1 Index]