plotHeatmapSRD {rSRD}

plotHeatmapSRD

Description

Heatmap is generated based on the pairwise distance - measured in SRD - of the columns. Each column is set as reference once, then SRD values are calculated for the other columns.

Usage

plotHeatmapSRD(df, output_to_file = FALSE)

Arguments

df

A DataFrame.

output_to_file

Logical. If true, the distance matrix will be saved to the hard drive.

Value

Returns a heatmap and the corresponding distance matrix.

Author(s)

Attila Gere [e-mail], Linus Olsson [e-mail], Jochen Staudacher [e-mail]

Examples

srdInput <- data.frame(
A=c(32, 52, 44, 44, 47),
B=c(73, 75, 65, 76, 70),
C=c(60, 59, 57, 55, 60),
D=c(35, 24, 44, 83, 47),
E=c(41, 52, 46, 50, 65))

plotHeatmapSRD(srdInput)