readFASTA {rDNAse} | R Documentation |
Read DNA/RNA Sequences in FASTA Format
Description
Read DNA/RNA Sequences in FASTA Format
Usage
readFASTA(file, legacy.mode = TRUE, seqonly = FALSE)
Arguments
file |
The name of the file which the sequences in fasta format are
to be read from. If it does not contain an absolute or
relative path, the file name is relative to the current
working directory, |
legacy.mode |
If set to |
seqonly |
If set to |
Details
This function reads DNA/RNA sequences in FASTA format.
Value
The result character vector
Note
Note
Author(s)
Min-feng Zhu <wind2zhu@163.com>
References
Pearson, W.R. and Lipman, D.J. (1988) Improved tools for biological sequence comparison. Proceedings of the National Academy of Sciences of the United States of America, 85: 2444-2448
Examples
x = readFASTA(system.file('dnaseq/hs.fasta', package = 'rDNAse'))