build_query_url {queryup}

Accessory function used to build the query url

Description

Accessory function used to build the query url

Usage

build_query_url(
  query = NULL,
  base_url = "https://rest.uniprot.org/uniprotkb/",
  columns = c("accession", "id", "gene_names", "organism_name", "reviewed"),
  format = "json"
)

Arguments

query

list of keys corresponding to UniProt's query fields. For example : list("gene_exact" = c("Pik3r1", "Pik3r2") , "organism" = c("10090", "9606"), "reviewed" = "yes")

base_url

The base url for the UniProt REST API

columns

names of UniProt data columns to retrieve.

format

format of the response provided by the UniProt API

Value

the query url