find.flanking {qtl} | R Documentation |
Find flanking markers for a specified position
Description
Find the genetic markers flanking a specified position on a chromosome, as well as the marker that is closest to the specified position.
Usage
find.flanking(cross, chr, pos)
Arguments
cross |
An object of class |
chr |
A vector of chromosome identifiers, or a single such. |
pos |
A vector of cM positions. |
Value
A data.frame, each row corresponding to one of the input positions. The first column contains the left-flanking markers, the second column contains the right-flanking markers, and the third column contains the markers closest to the specified positions.
Author(s)
Brian Yandell
See Also
find.marker
, plotPXG
,
find.markerpos
, find.pseudomarker
Examples
data(listeria)
find.flanking(listeria, 5, 28)
find.flanking(listeria, c(1, 5, 13), c(81, 28, 26))
[Package qtl version 1.66 Index]