Running Commands Remotely on 'Gridengine' Clusters


[Up] [Top]

Documentation for package ‘qsub’ version 1.1.3

Help Pages

cat_remote Read from a file remotely
cp_remote A wrapper around the scp shell command that handles local/remote files and allows copying between remote hosts via the local machine.
create_qsub_config Create a qsub configuration object.
create_ssh_connection Create an SSH connection with remote
file_exists_remote Checks if a local or remote file exists.
get_default_qsub_config Retrieve a default qsub_config.
instantiate_qsub_config Create an instance of the qsub_config.
is_job_running Check whether a job is running.
is_qsub_config Returns whether the passed object is a qsub_config object.
is_remote_local Tests whether the remote is a local host or not.
ls_remote View the contents of a directory remotely
mkdir_remote Creates a remote directory with the specified group ownership and permissions.
override_qsub_config Create a qsub configuration object.
qacct Run qacct on remote
qacct_remote Run qacct on remote
qstat_j Run qstat on remote
qstat_j_remote Run qstat on remote
qstat_remote Show the status of Grid Engine jobs and queues
qsub Running Commands Remotely on Gridengine Clusters
qsub_lapply Apply a Function over a List or Vector on a gridengine system!
qsub_retrieve Retrieve the results of a qsub execution.
qsub_run Run a Function on a gridengine system!
rm_remote Remove a file or folder
rsync_remote Rsync files between machines
run_remote 'run_remote' - Runs the command locally or remotely using ssh.
set_default_qsub_config Set a default qsub_config.
test_qsub_config Tests whether the passed object is a qsub_config object.
write_remote Write to a file remotely