qcQpcr {qcQpcr}

Histone ChIP-Seq qPCR Analyzer

Description

Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software <http://www.thermofisher.com/ca/en/home/life-science/pcr/real-time-pcr/real-time-pcr-instruments/viia-7-real-time-pcr-system/viia-7-software.html>). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC).

Usage

qcQpcr(xx, Name)

Arguments

xx

'Your Data Set'

Name

'.... Title for you graph, (ie: Projects name and date)'

Author(s)

Alireza Lorzadeh

Examples

library(ggplot2)
data(SampleTest)
qcQpcr(SampleTest,'Title for your graph')