convert_tmhmm_to_pureseqtm_topology {pureseqtmr}

Convert a TMHMM topology to a PureseqTM topology

Description

Convert a TMHMM topology to a PureseqTM topology

Usage

convert_tmhmm_to_pureseqtm_topology(tmhmm_topology)

Arguments

tmhmm_topology

topology as used by TMHMM

Value

a tibble with column names name and topology, as can be checked by check_topology

Author(s)

Richèl J.C. Bilderbeek

Examples

tmhmm_topo_filename <- system.file(
  "extdata", "UP000005640_9606_no_u.tmhmm", package = "pureseqtmr"
)
tmhmm_topology <- load_topology_file_as_tibble(tmhmm_topo_filename)
convert_tmhmm_to_pureseqtm_topology(tmhmm_topology)