Utilities for Processing Posterior Samples Stored in 'mcmc.lists'

Documentation for package ‘postpack’ version 0.5.4

array_format	Convert a vector to the array structure used in model
cjs	Example mcmc.list 1
cjs_no_rho	Example mcmc.list 2
density_plot	Create a density plot for a single desired node
diag_plots	Create MCMC diagnostic plots for nodes of interest
drop_index	Extract the base node name of a parameter
get_params	Obtain the names of all nodes
id_mat	Extract chain and iteration IDs for each sample
ins_regex_bracket	Insert escapes on regex brackets
ins_regex_lock	Insert the symbols to lock in a string for matching
list_out	List vector elements in a nice format
match_params	Find matching node names
mytitle	Add a title between two figures
postpack	Utilities for Processing Posterior Samples Stored in mcmc.lists
post_bind	Combine two objects containing posterior samples
post_convert	Convert MCMC samples to mcmc.list format
post_dim	Obtain MCMC dimensions from an mcmc.list
post_remove	Remove nodes from mcmc.list
post_subset	Extract samples from specific nodes
post_summ	Obtain posterior summaries and diagnostics of specific nodes
post_thin	Perform post-MCMC thinning
rm_regex_bracket	Remove escapes on regex brackets
rm_regex_lock	Remove the symbols that lock in a string for matching
trace_plot	Create a trace plot for a single desired node
vcov_decomp	Decompose the posterior of a variance-covariance node
write_model	Export BUGS/JAGS model from function to file