Tools for Working with Posterior Distributions
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Documentation for package ‘posterior’ version 1.6.0
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A B C D E F I M N O P Q R S T V W misc
| posterior-package | Tools for working with posterior (and prior) distributions |
-- A --
| all.rvar | Summaries of random variables within array elements, over draws |
| any.rvar | Summaries of random variables within array elements, over draws |
| as_draws | Transform to 'draws' objects |
| as_draws_array | The 'draws_array' format |
| as_draws_array.default | The 'draws_array' format |
| as_draws_array.draws_array | The 'draws_array' format |
| as_draws_array.draws_df | The 'draws_array' format |
| as_draws_array.draws_list | The 'draws_array' format |
| as_draws_array.draws_matrix | The 'draws_array' format |
| as_draws_array.draws_rvars | The 'draws_array' format |
| as_draws_array.mcmc | The 'draws_array' format |
| as_draws_array.mcmc.list | The 'draws_array' format |
| as_draws_df | The 'draws_df' format |
| as_draws_df.data.frame | The 'draws_df' format |
| as_draws_df.default | The 'draws_df' format |
| as_draws_df.draws_array | The 'draws_df' format |
| as_draws_df.draws_df | The 'draws_df' format |
| as_draws_df.draws_list | The 'draws_df' format |
| as_draws_df.draws_matrix | The 'draws_df' format |
| as_draws_df.draws_rvars | The 'draws_df' format |
| as_draws_df.mcmc | The 'draws_df' format |
| as_draws_df.mcmc.list | The 'draws_df' format |
| as_draws_list | The 'draws_list' format |
| as_draws_list.default | The 'draws_list' format |
| as_draws_list.draws_array | The 'draws_list' format |
| as_draws_list.draws_df | The 'draws_list' format |
| as_draws_list.draws_list | The 'draws_list' format |
| as_draws_list.draws_matrix | The 'draws_list' format |
| as_draws_list.draws_rvars | The 'draws_list' format |
| as_draws_list.mcmc | The 'draws_list' format |
| as_draws_list.mcmc.list | The 'draws_list' format |
| as_draws_matrix | The 'draws_matrix' format |
| as_draws_matrix.default | The 'draws_matrix' format |
| as_draws_matrix.draws_array | The 'draws_matrix' format |
| as_draws_matrix.draws_df | The 'draws_matrix' format |
| as_draws_matrix.draws_list | The 'draws_matrix' format |
| as_draws_matrix.draws_matrix | The 'draws_matrix' format |
| as_draws_matrix.draws_rvars | The 'draws_matrix' format |
| as_draws_matrix.mcmc | The 'draws_matrix' format |
| as_draws_matrix.mcmc.list | The 'draws_matrix' format |
| as_draws_rvars | The 'draws_rvars' format |
| as_draws_rvars.default | The 'draws_rvars' format |
| as_draws_rvars.draws_array | The 'draws_rvars' format |
| as_draws_rvars.draws_df | The 'draws_rvars' format |
| as_draws_rvars.draws_list | The 'draws_rvars' format |
| as_draws_rvars.draws_matrix | The 'draws_rvars' format |
| as_draws_rvars.draws_rvars | The 'draws_rvars' format |
| as_draws_rvars.list | The 'draws_rvars' format |
| as_draws_rvars.mcmc | The 'draws_rvars' format |
| as_draws_rvars.mcmc.list | The 'draws_rvars' format |
| as_rvar | Coerce to a random variable |
| as_rvar_factor | Coerce to a factor random variable |
| as_rvar_integer | Coerce to a random variable |
| as_rvar_logical | Coerce to a random variable |
| as_rvar_numeric | Coerce to a random variable |
| as_rvar_ordered | Coerce to a factor random variable |
-- B --
| bind_draws | Bind 'draws' objects together |
| bind_draws.draws_array | Bind 'draws' objects together |
| bind_draws.draws_df | Bind 'draws' objects together |
| bind_draws.draws_list | Bind 'draws' objects together |
| bind_draws.draws_matrix | Bind 'draws' objects together |
| bind_draws.draws_rvars | Bind 'draws' objects together |
-- C --
| cdf.rvar | Density, CDF, and quantile functions of random variables |
| cdf.rvar_factor | Density, CDF, and quantile functions of random variables |
| cdf.rvar_ordered | Density, CDF, and quantile functions of random variables |
| chain_ids | Index 'draws' objects |
| chol.rvar | Cholesky decomposition of random matrix |
| convergence | List of available convergence diagnostics |
-- D --
| default_convergence_measures | Summaries of 'draws' objects |
| default_mcse_measures | Summaries of 'draws' objects |
| default_summary_measures | Summaries of 'draws' objects |
| density.rvar | Density, CDF, and quantile functions of random variables |
| density.rvar_factor | Density, CDF, and quantile functions of random variables |
| diag-method | Matrix diagonals (including for random variables) |
| diagnostics | List of available convergence diagnostics |
| dissent | Dissention |
| dissent.default | Dissention |
| dissent.rvar | Dissention |
| draws | Transform to 'draws' objects |
| draws-index | Index 'draws' objects |
| draws_array | The 'draws_array' format |
| draws_df | The 'draws_df' format |
| draws_list | The 'draws_list' format |
| draws_matrix | The 'draws_matrix' format |
| draws_of | Get/set array of draws underlying a random variable |
| draws_of<- | Get/set array of draws underlying a random variable |
| draws_rvars | The 'draws_rvars' format |
| draws_summary | Summaries of 'draws' objects |
| draw_ids | Index 'draws' objects |
| drop-method | Drop redundant dimensions |
-- E --
| E | Summaries of random variables within array elements, over draws |
| entropy | Normalized entropy |
| entropy.default | Normalized entropy |
| entropy.rvar | Normalized entropy |
| ess_basic | Basic version of the effective sample size |
| ess_basic.default | Basic version of the effective sample size |
| ess_basic.rvar | Basic version of the effective sample size |
| ess_bulk | Bulk effective sample size (bulk-ESS) |
| ess_bulk.default | Bulk effective sample size (bulk-ESS) |
| ess_bulk.rvar | Bulk effective sample size (bulk-ESS) |
| ess_mean | Effective sample size for the mean |
| ess_mean.default | Effective sample sizes for quantiles |
| ess_mean.rvar | Effective sample size for the mean |
| ess_median | Effective sample sizes for quantiles |
| ess_quantile | Effective sample sizes for quantiles |
| ess_quantile.default | Effective sample sizes for quantiles |
| ess_quantile.rvar | Effective sample sizes for quantiles |
| ess_sd | Effective sample size for the standard deviation |
| ess_sd.default | Effective sample size for the standard deviation |
| ess_sd.rvar | Effective sample size for the standard deviation |
| ess_tail | Tail effective sample size (tail-ESS) |
| ess_tail.default | Tail effective sample size (tail-ESS) |
| ess_tail.rvar | Tail effective sample size (tail-ESS) |
| example_draws | Example 'draws' objects |
| extract_variable | Extract draws of a single variable |
| extract_variable.default | Extract draws of a single variable |
| extract_variable.draws | Extract draws of a single variable |
| extract_variable.draws_df | Extract draws of a single variable |
| extract_variable.draws_list | Extract draws of a single variable |
| extract_variable.draws_rvars | Extract draws of a single variable |
| extract_variable_array | Extract array of a single (possibly indexed) variable |
| extract_variable_array.default | Extract array of a single (possibly indexed) variable |
| extract_variable_array.draws | Extract array of a single (possibly indexed) variable |
| extract_variable_matrix | Extract matrix of a single variable |
| extract_variable_matrix.default | Extract matrix of a single variable |
| extract_variable_matrix.draws | Extract matrix of a single variable |
| extract_variable_matrix.draws_df | Extract matrix of a single variable |
| extract_variable_matrix.draws_list | Extract matrix of a single variable |
| extract_variable_matrix.draws_rvars | Extract matrix of a single variable |
-- F --
| format.rvar | Print or format a random variable |
| for_each_draw | Loop over draws |
-- I --
| is.finite.rvar | Summaries of random variables within array elements, over draws |
| is.infinite.rvar | Summaries of random variables within array elements, over draws |
| is.na.rvar | Summaries of random variables within array elements, over draws |
| is.nan.rvar | Summaries of random variables within array elements, over draws |
| is_draws | Transform to 'draws' objects |
| is_draws_array | The 'draws_array' format |
| is_draws_df | The 'draws_df' format |
| is_draws_list | The 'draws_list' format |
| is_draws_matrix | The 'draws_matrix' format |
| is_draws_rvars | The 'draws_rvars' format |
| is_rvar | Is 'x' a random variable? |
| is_rvar_factor | Is 'x' a factor random variable? |
| is_rvar_ordered | Is 'x' a factor random variable? |
| iteration_ids | Index 'draws' objects |
-- M --
| mad | Summaries of random variables within array elements, over draws |
| mad.default | Summaries of random variables within array elements, over draws |
| mad.rvar | Summaries of random variables within array elements, over draws |
| mad.rvar_ordered | Summaries of random variables within array elements, over draws |
| match | Value Matching |
| match.default | Value Matching |
| match.rvar | Value Matching |
| matrixOps.rvar | Matrix multiplication of random variables |
| max.rvar | Summaries of random variables within array elements, over draws |
| mcse_mean | Monte Carlo standard error for the mean |
| mcse_mean.default | Monte Carlo standard error for the mean |
| mcse_mean.rvar | Monte Carlo standard error for the mean |
| mcse_median | Monte Carlo standard error for quantiles |
| mcse_quantile | Monte Carlo standard error for quantiles |
| mcse_quantile.default | Monte Carlo standard error for quantiles |
| mcse_quantile.rvar | Monte Carlo standard error for quantiles |
| mcse_sd | Monte Carlo standard error for the standard deviation |
| mcse_sd.default | Monte Carlo standard error for the standard deviation |
| mcse_sd.rvar | Monte Carlo standard error for the standard deviation |
| mean.rvar | Summaries of random variables within array elements, over draws |
| median.rvar | Summaries of random variables within array elements, over draws |
| merge_chains | Merge chains of 'draws' objects |
| merge_chains.draws_array | Merge chains of 'draws' objects |
| merge_chains.draws_df | Merge chains of 'draws' objects |
| merge_chains.draws_list | Merge chains of 'draws' objects |
| merge_chains.draws_matrix | Merge chains of 'draws' objects |
| merge_chains.draws_rvars | Merge chains of 'draws' objects |
| merge_chains.rvar | Merge chains of 'draws' objects |
| min.rvar | Summaries of random variables within array elements, over draws |
| modal_category | Modal category |
| modal_category.default | Modal category |
| modal_category.rvar | Modal category |
| mutate_variables | Mutate variables in 'draws' objects |
| mutate_variables.draws_array | Mutate variables in 'draws' objects |
| mutate_variables.draws_df | Mutate variables in 'draws' objects |
| mutate_variables.draws_list | Mutate variables in 'draws' objects |
| mutate_variables.draws_matrix | Mutate variables in 'draws' objects |
| mutate_variables.draws_rvars | Mutate variables in 'draws' objects |
-- N --
| nchains | Index 'draws' objects |
| ndraws | Index 'draws' objects |
| niterations | Index 'draws' objects |
| nvariables | Get variable names from 'draws' objects |
-- O --
| order_draws | Order 'draws' objects |
| order_draws.draws_array | Order 'draws' objects |
| order_draws.draws_df | Order 'draws' objects |
| order_draws.draws_list | Order 'draws' objects |
| order_draws.draws_matrix | Order 'draws' objects |
| order_draws.draws_rvars | Order 'draws' objects |
| order_draws.rvar | Order 'draws' objects |
-- P --
| pareto_convergence_rate | Pareto smoothing diagnostics |
| pareto_convergence_rate.default | Pareto smoothing diagnostics |
| pareto_convergence_rate.rvar | Pareto smoothing diagnostics |
| pareto_diags | Pareto smoothing diagnostics |
| pareto_diags.default | Pareto smoothing diagnostics |
| pareto_diags.rvar | Pareto smoothing diagnostics |
| pareto_khat | Pareto khat diagnostic |
| pareto_khat.default | Pareto khat diagnostic |
| pareto_khat.rvar | Pareto khat diagnostic |
| pareto_khat_threshold | Pareto smoothing diagnostics |
| pareto_khat_threshold.default | Pareto smoothing diagnostics |
| pareto_khat_threshold.rvar | Pareto smoothing diagnostics |
| pareto_min_ss | Pareto smoothing diagnostics |
| pareto_min_ss.default | Pareto smoothing diagnostics |
| pareto_min_ss.rvar | Pareto smoothing diagnostics |
| pareto_smooth | Pareto smoothing |
| pareto_smooth.default | Pareto smoothing |
| pareto_smooth.rvar | Pareto smoothing |
| posterior | Tools for working with posterior (and prior) distributions |
| Pr | Summaries of random variables within array elements, over draws |
| Pr.default | Summaries of random variables within array elements, over draws |
| Pr.logical | Summaries of random variables within array elements, over draws |
| Pr.rvar | Summaries of random variables within array elements, over draws |
| print.draws_array | Print 'draws_array' objects |
| print.draws_df | Print 'draws_df' objects |
| print.draws_list | Print 'draws_list' objects |
| print.draws_matrix | Print 'draws_matrix' objects |
| print.draws_rvars | Print 'draws_rvars' objects |
| print.draws_summary | Print summaries of 'draws' objects |
| print.rvar | Print or format a random variable |
| prod.rvar | Summaries of random variables within array elements, over draws |
| ps_convergence_rate | Pareto convergence rate |
| ps_khat_threshold | Pareto k-hat threshold |
| ps_min_ss | Pareto-smoothing minimum sample-size |
| ps_tail_length | Pareto tail length |
-- Q --
| quantile.rvar | Density, CDF, and quantile functions of random variables |
| quantile.rvar_factor | Density, CDF, and quantile functions of random variables |
| quantile.rvar_ordered | Density, CDF, and quantile functions of random variables |
| quantile2 | Compute Quantiles |
| quantile2.default | Compute Quantiles |
| quantile2.rvar | Compute Quantiles |
-- R --
| range.rvar | Summaries of random variables within array elements, over draws |
| rdo | Execute expressions of random variables |
| rename_variables | Rename variables in 'draws' objects |
| rename_variables.draws | Rename variables in 'draws' objects |
| repair_draws | Repair indices of 'draws' objects |
| repair_draws.draws_array | Repair indices of 'draws' objects |
| repair_draws.draws_df | Repair indices of 'draws' objects |
| repair_draws.draws_list | Repair indices of 'draws' objects |
| repair_draws.draws_matrix | Repair indices of 'draws' objects |
| repair_draws.draws_rvars | Repair indices of 'draws' objects |
| repair_draws.rvar | Repair indices of 'draws' objects |
| resample_draws | Resample 'draws' objects |
| resample_draws.draws | Resample 'draws' objects |
| resample_draws.rvar | Resample 'draws' objects |
| reserved_variables | Reserved variables |
| reserved_variables.default | Reserved variables |
| reserved_variables.draws_array | Reserved variables |
| reserved_variables.draws_df | Reserved variables |
| reserved_variables.draws_list | Reserved variables |
| reserved_variables.draws_matrix | Reserved variables |
| reserved_variables.draws_rvars | Reserved variables |
| rfun | Create functions of random variables |
| rhat | Rhat convergence diagnostic |
| rhat.default | Rhat convergence diagnostic |
| rhat.rvar | Rhat convergence diagnostic |
| rhat_basic | Basic version of the Rhat convergence diagnostic |
| rhat_basic.default | Basic version of the Rhat convergence diagnostic |
| rhat_basic.rvar | Basic version of the Rhat convergence diagnostic |
| rhat_nested | Nested Rhat convergence diagnostic |
| rhat_nested.default | Nested Rhat convergence diagnostic |
| rhat_nested.rvar | Nested Rhat convergence diagnostic |
| rstar | Calculate R* convergence diagnostic |
| rvar | Random variables of arbitrary dimension |
| rvar-dist | Density, CDF, and quantile functions of random variables |
| rvar-matmult | Matrix multiplication of random variables |
| rvar-slice | Random variable slicing |
| rvar-summaries-over-draws | Summaries of random variables within array elements, over draws |
| rvar-summaries-within-draws | Summaries of random variables over array elements, within draws |
| rvar_all | Summaries of random variables over array elements, within draws |
| rvar_any | Summaries of random variables over array elements, within draws |
| rvar_apply | Random variable resulting from a function applied over margins of an array or random variable |
| rvar_factor | Factor random variables of arbitrary dimension |
| rvar_ifelse | Random variable ifelse |
| rvar_is_finite | Special value predicates for random variables |
| rvar_is_infinite | Special value predicates for random variables |
| rvar_is_na | Special value predicates for random variables |
| rvar_is_nan | Special value predicates for random variables |
| rvar_mad | Summaries of random variables over array elements, within draws |
| rvar_max | Summaries of random variables over array elements, within draws |
| rvar_mean | Summaries of random variables over array elements, within draws |
| rvar_median | Summaries of random variables over array elements, within draws |
| rvar_min | Summaries of random variables over array elements, within draws |
| rvar_ordered | Factor random variables of arbitrary dimension |
| rvar_prod | Summaries of random variables over array elements, within draws |
| rvar_quantile | Summaries of random variables over array elements, within draws |
| rvar_range | Summaries of random variables over array elements, within draws |
| rvar_rng | Create random variables from existing random number generators |
| rvar_sd | Summaries of random variables over array elements, within draws |
| rvar_sum | Summaries of random variables over array elements, within draws |
| rvar_var | Summaries of random variables over array elements, within draws |
-- S --
| sd | Summaries of random variables within array elements, over draws |
| sd.default | Summaries of random variables within array elements, over draws |
| sd.rvar | Summaries of random variables within array elements, over draws |
| set_variables | Set variable names in 'draws' objects |
| split_chains | Split Chains |
| str.rvar | Print or format a random variable |
| subset.draws | Subset 'draws' objects |
| subset_draws | Subset 'draws' objects |
| subset_draws.draws_array | Subset 'draws' objects |
| subset_draws.draws_df | Subset 'draws' objects |
| subset_draws.draws_list | Subset 'draws' objects |
| subset_draws.draws_matrix | Subset 'draws' objects |
| subset_draws.draws_rvars | Subset 'draws' objects |
| subset_draws.rvar | Subset 'draws' objects |
| sum.rvar | Summaries of random variables within array elements, over draws |
| summarise_draws | Summaries of 'draws' objects |
| summarise_draws.draws | Summaries of 'draws' objects |
| summarise_draws.rvar | Summaries of 'draws' objects |
| summarize_draws | Summaries of 'draws' objects |
| summary.draws | Summaries of 'draws' objects |
| Summary.rvar | Summaries of random variables within array elements, over draws |
| summary.rvar | Summaries of 'draws' objects |
-- T --
| thin | Thin 'draws' objects |
| thin_draws | Thin 'draws' objects |
| thin_draws.draws | Thin 'draws' objects |
| thin_draws.rvar | Thin 'draws' objects |
-- V --
| var | Summaries of random variables within array elements, over draws |
| var.default | Summaries of random variables within array elements, over draws |
| var.rvar | Summaries of random variables within array elements, over draws |
| variables | Get variable names from 'draws' objects |
| variables.draws_array | Get variable names from 'draws' objects |
| variables.draws_df | Get variable names from 'draws' objects |
| variables.draws_list | Get variable names from 'draws' objects |
| variables.draws_matrix | Get variable names from 'draws' objects |
| variables.draws_rvars | Get variable names from 'draws' objects |
| variables<- | Set variable names in 'draws' objects |
| variables<-.draws_array | Set variable names in 'draws' objects |
| variables<-.draws_df | Set variable names in 'draws' objects |
| variables<-.draws_list | Set variable names in 'draws' objects |
| variables<-.draws_matrix | Set variable names in 'draws' objects |
| variables<-.draws_rvars | Set variable names in 'draws' objects |
| variance.rvar | Summaries of random variables within array elements, over draws |
-- W --
| weights.draws | Extract Weights from Draws Objects |
| weight_draws | Weight 'draws' objects |
| weight_draws.draws_array | Weight 'draws' objects |
| weight_draws.draws_df | Weight 'draws' objects |
| weight_draws.draws_list | Weight 'draws' objects |
| weight_draws.draws_matrix | Weight 'draws' objects |
| weight_draws.draws_rvars | Weight 'draws' objects |
-- misc --
| %**% | Matrix multiplication of random variables |
| %in% | Value Matching |
| [.rvar | Random variable slicing |
| [<-.rvar | Random variable slicing |
| [[.rvar | Random variable slicing |
| [[<-.rvar | Random variable slicing |