03.Morris {popbio} | R Documentation |
Converted Matlab functions from Morris and Doak (2002)
Description
Chapter 3
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grizzly
Table 3.1. Grizzly bear population counts. The example includes code to calculate mean, variance and confidence intervals using regression and other procedures
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extCDF
Box 3.3. Count-based extinction time cumulative distribution function
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countCDFxt
Box 3.4. Count-based extinction probabilities with bootstrap confidence intervals
Chapter 7
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stoch.projection
Box 7.3. Project stochastic growth from a sequence of matrices
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stoch.growth.rate
Box 7.4. Calculate the log stochastic growth rate by Tuljapukar's approximation and by simulation
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stoch.quasi.ext
Box 7.5. Estimate quasi-extinction threshold
Chapter 8
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Kendall
Box 8.2. Kendall's method to correct for sampling variation
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betaval
Box 8.3. Generate beta-distributed random numbers
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lnorms
Box 8.4. Generate random lognormal values
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stretchbetaval
Box 8.5. Generate stretched beta-distributed random numbers
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vitalsim
Box 8.10. Calculate stochastic growth rate and extinction time CDF using vital rates
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multiresultm
Box 8.11. Incorporate demographic stochasticity into population projections
Chapter 9
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vitalsens
Box 9.1. Vital rate sensitivity and elasticity