Gene-Based Association Tests using the Actual Impurity Reduction
(AIR) Variable Importance
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Documentation for package ‘poolVIM’ version 1.0.0
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| fisher | fisher |
| gaussianize | gaussianize null variable importances |
| m_effective | meff. |
| poolVIM | after the Actual Impurity Reduction Importance is computed with a Random Forest, pvalues from different probes or SNPs belonging to the same gene can be aggregated in order to obtain a single pvalue for that gene. Correlation between probes can also be taken into account. |
| tippett | tippett. |