write.pwd {polymapR} | R Documentation |
Write a JoinMap compatible .pwd file from linkage data.frame.
Description
Output of this function allows to use JoinMap to perform the marker ordering step.
Usage
write.pwd(linkage_df, pwd_file, file_info, log = NULL)
Arguments
linkage_df |
A linkage |
pwd_file |
A character string specifying a file open for writing. |
file_info |
A character string added to the first lines of the .pwd file. |
log |
Character string specifying the log filename to which standard output should be written. If NULL log is send to stdout. |
Examples
## Not run:
data("all_linkages_list_P1_split")
write.pwd(all_linkages_list_P1_split[["LG3"]][["homologue1"]],
"LG3_homologue1_P1.pwd",
"Please feed me to JoinMap")
## End(Not run)
[Package polymapR version 1.1.6 Index]