MDSMap_from_list {polymapR} | R Documentation |
Wrapper function for MDSMap to generate linkage maps from list of pairwise linkage estimates
Description
Create multidimensional scaling maps from a list of linkages
Usage
MDSMap_from_list(
linkage_list,
write_to_file = FALSE,
mapdir = "mapping_files_MDSMap",
plot_prefix = "",
log = NULL,
...
)
Arguments
linkage_list |
A named |
write_to_file |
Should output be written to a file? By default |
mapdir |
Directory to which map input files are initially written. Also used for output if |
plot_prefix |
prefix for the filenames of output plots. |
log |
Character string specifying the log filename to which standard output should be written. If NULL log is send to stdout. |
... |
Arguments passed to |
Examples
## Not run:
data("all_linkages_list_P1")
maplist_P1 <- MDSMap_from_list(all_linkages_list_P1[1])
## End(Not run)