raw_grid {platetools}

Plots multiple platemaps with heatmap of raw values

Description

Converts numerical values. well labels, and plate labels into multiple plate heatmaps

Usage

raw_grid(data, well, plate_id, ncols = 2, plate = 96, ...)

Arguments

data

Numerical values to be plotted

well

Vector of well identifiers e.g "A01"

plate_id

Vector of plate identifiers e.g "Plate_1"

ncols

Number of columns to display multiple heatmaps

plate

Number of wells in complete plate (96, 384 or 1536)

...

additional parameters to plot wrappers

Value

ggplot plot

Examples

df01 <- data.frame(well = num_to_well(1:96),
  vals = rnorm(96),
  plate = 1)

df02 <- data.frame(well = num_to_well(1:96),
  vals = rnorm(96),
  plate = 2)

df <- rbind(df01, df02)

raw_grid(data = df$vals,
    well = df$well,
    plate_id = df$plate,
    plate = 96)