| result_Gratiot {phenology} | R Documentation |
Result of the fit of Leatherback nest counts
Description
Result of the fit of Leatherback nest counts from Gratiot et al. (2006) Figure 1 The phenology has been fitted with MinE, MinB, Max, Flat, LengthB, LengthE, Peak, Theta.
Usage
result_Gratiot
Format
A list with Gratiot data and the result of the fit.
Details
Result of the fit of Leatherback nest counts from Gratiot et al. (2006) Figure 1
Author(s)
Marc Girondot marc.girondot@u-psud.fr
References
Gratiot, N., Gratiot, J., de Thoisy, B. & Kelle, L. 2006. Estimation of marine turtles nesting season from incomplete data ; statistical adjustment of a sinusoidal function. Animal Conservation, 9, 95-102.
See Also
Other Phenology model:
AutoFitPhenology(),
BE_to_LBLE(),
Gratiot,
LBLE_to_BE(),
LBLE_to_L(),
L_to_LBLE(),
MarineTurtles_2002,
MinBMinE_to_Min(),
adapt_parameters(),
add_SE(),
add_phenology(),
extract_result(),
fit_phenology(),
likelihood_phenology(),
logLik.phenology(),
map_Gratiot,
map_phenology(),
par_init(),
phenology2fitRMU(),
phenology_MHmcmc_p(),
phenology_MHmcmc(),
phenology(),
plot.phenologymap(),
plot.phenology(),
plot_delta(),
plot_phi(),
print.phenologymap(),
print.phenologyout(),
print.phenology(),
remove_site(),
result_Gratiot1,
result_Gratiot2,
result_Gratiot_Flat,
result_Gratiot_mcmc,
summary.phenologymap(),
summary.phenologyout(),
summary.phenology()
Examples
## Not run:
library(phenology)
data(Gratiot)
# Generate a formatted list nammed data_Gratiot
data_Gratiot <- add_phenology(Gratiot, name="Complete",
reference=as.Date("2001-01-01"), format="%d/%m/%Y")
# Generate initial points for the optimisation
parg <- par_init(data_Gratiot, fixed.parameters=NULL)
# Run the optimisation
result_Gratiot <- fit_phenology(data=data_Gratiot,
fitted.parameters=parg, fixed.parameters=NULL)
# Read a file with result
data(result_Gratiot)
## End(Not run)