| remove_site {phenology} | R Documentation |
Removes site information from a set of parameters.
Description
This function is used to remove the information of the site from a set of parameters. It can be used to other timeseries after.
Usage
remove_site(parameters = NULL, help = FALSE)
Arguments
parameters |
Set of parameters |
help |
If TRUE, an help is displayed |
Details
remove_site removes beach information from a set of parameters.
Value
Return a set of modified parameters
Author(s)
Marc Girondot
See Also
Other Phenology model:
AutoFitPhenology(),
BE_to_LBLE(),
Gratiot,
LBLE_to_BE(),
LBLE_to_L(),
L_to_LBLE(),
MarineTurtles_2002,
MinBMinE_to_Min(),
adapt_parameters(),
add_SE(),
add_phenology(),
extract_result(),
fit_phenology(),
likelihood_phenology(),
logLik.phenology(),
map_Gratiot,
map_phenology(),
par_init(),
phenology2fitRMU(),
phenology_MHmcmc_p(),
phenology_MHmcmc(),
phenology(),
plot.phenologymap(),
plot.phenology(),
plot_delta(),
plot_phi(),
print.phenologymap(),
print.phenologyout(),
print.phenology(),
result_Gratiot1,
result_Gratiot2,
result_Gratiot_Flat,
result_Gratiot_mcmc,
result_Gratiot,
summary.phenologymap(),
summary.phenologyout(),
summary.phenology()
Examples
library(phenology)
# Read a file with data
data(Gratiot)
# Generate a formatted list nammed data_Gratiot
data_Gratiot<-add_phenology(Gratiot, name="Complete",
reference=as.Date("2001-01-01"), format="%d/%m/%Y")
# Generate initial points for the optimisation
parg<-par_init(data_Gratiot, fixed.parameters=NULL)
# Run the optimisation
## Not run:
result_Gratiot<-fit_phenology(data=data_Gratiot,
fitted.parameters=parg, fixed.parameters=NULL)
## End(Not run)
data(result_Gratiot)
# Extract parameters form result
parg<-extract_result(result_Gratiot)
# Remove site information
parg1<-remove_site(parg)