| phenModel-package {phenModel} | R Documentation |
Insect Phenology Model Evaluation Based on Daily Temperatures
Description
Generates predicted stage change days for an insect, based on daily temperatures and development rate parameters, as developed by Pollard (2014) <http://mural.maynoothuniversity.ie/view/ethesisauthor/Pollard=3ACiaran_P=2E=3A=3A.html>. A few example datasets are included and implemented for P. vulgatissima, the blue willow beetle, but the approach can be readily applied to other species that display similar behaviour.
Details
The DESCRIPTION file:
| Package: | phenModel |
| Type: | Package |
| Title: | Insect Phenology Model Evaluation Based on Daily Temperatures |
| Version: | 1.0 |
| Date: | 2019-08-01 |
| Authors@R: | c(person("Rafael", "de Andrade Moral", role = c("aut", "cre"), email = "rafael.deandrademoral@mu.ie"), person("Rowan", "Fealy", role = "aut")) |
| Author: | Rafael de Andrade Moral [aut, cre], Rowan Fealy [aut] |
| Maintainer: | Rafael de Andrade Moral <rafael.deandrademoral@mu.ie> |
| Depends: | R (>= 3.0.0), ggplot2, dplyr, reshape, grid |
| Description: | Generates predicted stage change days for an insect, based on daily temperatures and development rate parameters, as developed by Pollard (2014) <http://mural.maynoothuniversity.ie/view/ethesisauthor/Pollard=3ACiaran_P=2E=3A=3A.html>. A few example datasets are included and implemented for P. vulgatissima, the blue willow beetle, but the approach can be readily applied to other species that display similar behaviour. |
| License: | GPL (>=2) |
Index of help topics:
assign_observed_data Observed Data Preparation
bp_maxmin Internal functions to used to evaluate a
phenology model and plot the results
casement9596 Casement 1995-1996 Data
cdl_check Plots for Checking Sensitivity to CDL
cum_dev_rate Cumulative Development Rates
get_cycle Obtain Yearly Cycles
get_total_info Compute Day Length, Mean Temperature, Thermal
Units, and Cumulative Chill Days
phenModel-package Insect Phenology Model Evaluation Based on
Daily Temperatures
phen_model Phenology Model Evaluation
phen_model_forecast Multi-Year Forecast Based on the Phenology
Model
phen_model_gen2 Phenology Model Evaluation for Further
Generations
plot_phen_forecast Plot Phenology Model Multi-Year Forecast
plot_phen_model Plot Phenology Model Evaluations
pvulg_budburst_parameters
Estimated Parameters for the Exponential Decay
Model for Budburst
pvulg_lactin_parameters
Estimated Parameters for the Lactin Model for
P. Vulgatissima
pvulg_weibull_parameters
Estimated Parameters for the Weibull Model for
P. Vulgatissima
sensitivity Sensitivity Analysis for Evaluated Phenology
Model
valentia Valentia Data
Author(s)
Rafael de Andrade Moral [aut, cre], Rowan Fealy [aut]
Maintainer: Rafael de Andrade Moral <rafael.deandrademoral@mu.ie>
References
Pollard C.P., Griffin C.T., Moral R.A., Duffy C., Chuche J., Gaffney M.T., Fealy R. (submitted) phenModel: a temperature-dependent phenology model for the blue willow beetle, Phratora vulgatissima.