Gene-Level Variant Association Tests for Pedigree Data

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Documentation for package ‘pedgene’ version 3.9

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

example.geno	Example datasets for pedgene
example.map	Example datasets for pedgene
example.ped	Example datasets for pedgene
example.relation	Example datasets for pedgene
format_relation	Internal utility to format the matrix used to specify special relationships between pairs of individuals
pedgene	Compute Kernel and Burden Statistics for Pedigree Data (possibly with unrelated subjects)
pedgene.stats	Compute Kernel and Burden Statistics for Pedigree Data (possibly with unrelated subjects)
pedigreeChecks	Validity checks on pedigree data
print.pedgene	Compute Kernel and Burden Statistics for Pedigree Data (possibly with unrelated subjects)
quadfactor	Internal utility to calculate a constant quadratic factor for gene-level statistics variances, over all pedigrees
summary.pedgene	Compute Kernel and Burden Statistics for Pedigree Data (possibly with unrelated subjects)