viral_east_mediteranean {peRiodiCS} | R Documentation |
Viral etiology, seasonality and severity of hospitalized patients with severe acute respiratory infections in the Eastern Mediterranean Region, 2007-2014
Description
Data about infections with different viruses across several years.
For more information see Source and References section.
Usage
viral_east_mediteranean
Format
A data frame with variables:
- UniqueID
record identification number
- Enrolled
Did the patient consent and enroll in the study?: 1=Yes, 0=No
- Country
Country of enrollment: Egypt, Jordan, Oman, Qatar, Yemen
- EpiYear
Year of enrollment: Integers (2007-2014)
- EpiMonth
Month of enrollment: Integers (1-12)
- EpiWeek
Week of enrollment: Integers (1-53)
- Interval
Number of days between onset of symptoms and hospitalization: Integer
- Stay
Number of days between hospitalization and outcome: Integer
- Sex
Sex: 1=Female, 0=Male
- AgeGrp
Age group: 1=<1 year, 2=1-4 years, 3=5-49 years, 4=50+ years
- ChronicDis
Does the patient have any pre-existing chronic disease?: 1=Yes, 0=No
- OxTherapy
Did the patient receive oxygen therapy during hospitalization?: 1=Yes, 0=No
- Ventilated
Was the patient ventilated during hospitalization?: 1=Yes, 0=No
- ICU
Was the patient admitted to an intensive care unit during hospitalization?: 1=Yes, 0=No
- Outcome
What was the patient"'"s final hospitalization outcome?: 1=Discharge, 2=Transfer, 3=Death
- RSV
Results for respiratory syncytial virus: 1=Positive, 0=Negative
- AdV
Results for adenovirus: 1=Positive, 0=Negative
- hMPV
Results for human metapneumovirus: 1=Positive, 0=Negative
- hPIV1
Results for human parainfluenzavirus type 1: 1=Positive, 0=Negative
- hPIV2
Results for human parainfluenzavirus type 2: 1=Positive, 0=Negative
- hPIV3
Results for human parainfluenzavirus type 3: 1=Positive, 0=Negative
- Flu
Results for influenza: 1=Positive, 0=Negative
Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0180954
References
Horton, Katherine C. AND Dueger, Erica L. AND Kandeel, Amr AND Abdallat, Mohamed AND El-Kholy, Amani AND Al-Awaidy, Salah AND Kohlani, Abdul Hakim AND Amer, Hanaa AND El-Khal, Abel Latif AND Said, Mayar AND House, Brent AND Pimentel, Guillermo AND Talaat, Maha (2017). Viral etiology, seasonality and severity of hospitalized patients with severe acute respiratory infections in the Eastern Mediterranean Region, 2007-2014. PLOS ONE, 12, 1-17.