add_alpha |
Add alpha for a Rcolor |
add_analysis |
Add an analysis for a project |
add_theme |
Add a global gg_theme and colors for plots |
areaplot |
Plot a stack plot |
change_fac_lev |
Change factor levels |
china_map |
Plot china map |
copy_df |
Copy a data.frame |
copy_vector |
Copy a vector |
count2 |
Like 'uniq -c' in shell to count a vector |
dabiao |
Print some message with = |
del_ps |
Detach packages |
df2distance |
Convert Three-column Data to Distance Matrix |
df2link |
df to link table |
download2 |
Download File |
download_ncbi_genome_file |
Download genome files from NCBI based on accession number |
explode |
Explode a data.frame if there are split charter in one column |
fittest |
Fit a distribution |
generate_labels |
Generate labels position |
get_cols |
Get n colors |
gghist |
gg histogram |
gghuan |
Plot a doughnut chart |
gghuan2 |
gghuan2 for multi-doughnut chart |
ggmosaic |
ggmosaic for mosaic plot |
ggplot_lim |
Get a ggplot xlim and ylim |
ggplot_translator |
Translate axis label of a ggplot |
grepl.data.frame |
Grepl applied on a data.frame |
group_box |
Plot a boxplot |
group_test |
Performs multiple mean comparisons for a data.frame |
gsub.data.frame |
Gsub applied on a data.frame |
guolv |
Filter your data |
hebing |
Group your data |
how_to_set_font_for_plot |
How to set font for ggplot |
how_to_set_options |
How to set options in a package |
how_to_update_parameters |
How to update parameters |
how_to_use_parallel |
How to use parallel |
how_to_use_sbatch |
How to use sbatch |
is.ggplot.color |
Judge if a characteristic is Rcolor |
legend_size |
Scale a legend size |
lib_ps |
Attach packages or install packages have not benn installed |
little_guodong |
My cat |
lm_coefficients |
Get coefficients of linear regression model |
make_gitbook |
Make a Gitbook using bookdown |
make_project |
Make a R-analysis project |
match_df |
Match otutab and metadata |
metadata |
test data for pcutils package |
mmscale |
Min_Max scale |
multireg |
Multiple regression/ variance decomposition analysis |
multitest |
Multi-groups test |
my_cat |
Show my little cat named Guo Dong which drawn by my girlfriend. |
my_circle_packing |
My Circle packing plot |
my_circo |
My circo plot |
my_lm |
Fit a linear model and plot |
my_sunburst |
My Sunburst plot |
my_treemap |
My Treemap plot |
my_voronoi_treemap |
My Voronoi treemap plot |
otutab |
test data for pcutils package |
plot.coefficients |
Plot coefficients as a bar chart or lollipop chart |
plotgif |
Plot a gif |
plotpdf |
Plot a multi-pages pdf |
prepare_package |
Prepare a package |
pre_number_str |
Prepare a numeric string |
read.file |
Read some special format file |
read_fasta |
Read fasta file |
remove.outliers |
Remove outliers |
rgb2code |
Transform a rgb vector to a Rcolor code |
rm_low |
Remove the low relative items in each column |
sample_map |
Plot the sampling map |
sanxian |
Three-line table |
scale_color_pc |
Scale a fill color |
scale_fill_pc |
Scale a fill color |
search_browse |
Search and browse the web for specified terms |
set_pcutils_config |
Set config |
show_pcutils_config |
Show config |
split_text |
Split text into parts, each not exceeding a specified character count |
squash |
Squash one column in a data.frame using other columns as id. |
stackplot |
Plot a stack plot |
strsplit2 |
Split Composite Names |
t2 |
Transpose data.frame |
taxonomy |
test data for pcutils package |
tax_pie |
Pie plot |
tidai |
Replace a vector by named vector |
trans |
Trans format your data |
translator |
Translator |
trans_format |
Transfer the format of file |
twotest |
Two-group test |
update_NEWS_md |
Update the NEW.md for a package |
update_param |
Update the parameters |
venn |
Plot a general venn (upset, flower) |
venn.data.frame |
Plot a general venn (upset, flower) |
venn.list |
Plot a general venn (upset, flower) |
write_fasta |
Write a data.frame to fasta |