volcano_p {pctax}

Volcano plot for difference analysis

Description

Volcano plot for difference analysis

Usage

volcano_p(
  res,
  logfc = 1,
  adjp = 0.05,
  text = TRUE,
  repel = TRUE,
  mode = 1,
  number = FALSE
)

Arguments

res

result of diff_da which have colnames: tax, log2FoldChange, padj, compare, sig

logfc

log_fold_change threshold

adjp

adjust_p_value threshold

text

text, TRUE

repel

repel, TRUE

mode

1:normal; 2:multi_contrast

number

show the tax number

Value

ggplot

See Also

diff_da