micro_sbatch {pctax}

Microbiome sbatch

Description

Microbiome sbatch

Usage

micro_sbatch(
  work_dir = "/share/home/jianglab/pengchen/work/asthma/",
  step = "fastp",
  all_sample_num = 40,
  array = 1,
  partition = "cpu",
  cpus_per_task = 1,
  mem_per_cpu = "2G"
)

Arguments

work_dir

work_dir

step

"fastp","rm_human","megahit","prodigal","salmon-quant",...

all_sample_num

all sample number

array

array number

partition

partition

cpus_per_task

cpus_per_task

mem_per_cpu

mem_per_cpu, "2G"

Value

No value