Tools for Regression Using Pre-Computed Summary Statistics

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Documentation for package ‘pcsstools’ version 0.1.2

• DESCRIPTION file.
• Package NEWS.

Help Pages

anova.pcsslm	ANOVA for linear models fit using PCSS
anova.pcsslmlist	ANOVA for linear models fit using PCSS
approx_and	Approximate a linear model for a series of logical AND statements
approx_conditional	Approximate the mean of Y conditional on X
approx_mult_prod	Approximate the covariance of a set of predictors and a product of responses
approx_or	Approximate a linear model for a series of logical OR statements
approx_prod_stats	Approximate summary statistics for a product of phenotypes and a set of predictors
approx_response_cov_recursive	Approximate the covariance of one response with an arbitrary product of responses.
calculate_lm	Calculate a linear model using PCSS
calculate_lm_combo	Calculate a linear model for a linear combination of responses
check_terms	Check that independent and dependent variables are accounted for through PCSS
extract_predictors	Extract independent variables from a formula
extract_response	Extract dependent variables from a formula as a string
get_pcor	Approximate the partial correlation of Y and Z given X
guess_response	Guess the function that is applied to a set of responses
make_permutations	List all permutations of a sequence of integers
model_and	Approximate a linear model for a series of logical AND statements using PCSS
model_combo	Model a linear combination of a set of phenotypes using PCSS
model_or	Approximate a linear model for a series of logical OR statements using PCSS
model_prcomp	Model the principal component score of a set of phenotypes using PCSS
model_product	Approximate a linear model for a product using PCSS
model_singular	Model an individual phenotype using PCSS
new_predictor	Create an object of class "predictor"
new_predictor_binary	Shortcut to create a predictor object for a binary variable
new_predictor_normal	Shortcut to create a predictor object for a continuous variable
new_predictor_snp	Shortcut to create a predictor object for a SNP's minor allele counts
pcsslm	Approximate a linear model using PCSS
pcsstools_example	Simulated example data
print.pcsslm	Print an object of class pcsslm