pbat.help {pbatR}

Help and Reporting Information

Description

Provides some helpful suggestions and information if you are having some troubles getting the package set up (often tends to be version related). Information useful for reporting.

Usage

pbat.help(bug=FALSE, full=TRUE, ped=NULL, phe=NULL, lib.loc=NULL)
pbat.firsttime()

Arguments

bug

Whether you think a bug was found on a run. Will attempt to generate some useful information for the developers.

full

When bug=TRUE, runs a full bug report (slower, reruns analysis, but recommended.

ped

Pedigree object that can be obfuscated (see ‘obfuscate’).

phe

Phenotype object that can be obfuscated (see ‘obfuscate’).

lib.loc

a character vector describing the location of R library trees to search through, or 'NULL', i.e what/if you specified for this when the library was loaded.

See Also

pbat obfuscate