get_reactome_gsets {pathfindR}

Retrieve Reactome Pathway Gene Sets

Description

Retrieve Reactome Pathway Gene Sets

Usage

get_reactome_gsets()

Value

Gets the latest Reactome pathways gene sets in gmt format. Parses the gmt file and returns a list containing 2 elements:

• gene_sets - A list containing the genes involved in each Reactome pathway

• descriptions - A named vector containing the descriptions for each Reactome pathway