all_ids_mi2b2 {parseRPDR} | R Documentation |
Legacy function to create a vector of all possible IDs for mi2b2 workbench
Description
Legacy function to gather all possible MGH and BWH IDs from mrn.txt and con.txt input sources to provide a vector of all possible MGH or BWH IDs to be used as a data request for mi2b2 workbench.
Usage
all_ids_mi2b2(type = "MGH", d_mrn, d_con)
Arguments
type |
string, either "MGH" or "BWH" specifying which IDs to use. |
d_mrn |
data.table, parsed mrn dataset using the load_mrn function. |
d_con |
data.table, parsed con dataset using the load_con function. |
Value
vector, with all MGH or BWH IDs that occur in the con and mrn datasources for all patients. Previously this was required to for mi2b2 workbenches allowing access to all possible images of the patients, even if the MGH or BWH changed over time.
Examples
## Not run:
all_MGH_mrn <- all_ids_mi2b2(type = "MGH", d_mrn = data_mrn, d_con = data_con)
## End(Not run)
[Package parseRPDR version 1.1.1 Index]