Geometric Morphometric Tools for Paleobiology


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Documentation for package ‘paleomorph’ version 0.1.4

Help Pages

countMissing Count the number of missing landmarks in an array
covar Calculate covariance matrix between individual landmark coordinates
dotcorr Calculate 3D vector correlation matrix using the congruence coefficient. Skips any missing values in computation of correlation matrix
dotcvm Calculate 2d or 3D covariance matrix using unscaled congruence coefficient. Skips any missing values in computation of covariance matrix
mirrorfill Fill missing symmetrical landmarks for all specimens in an array using mirrored values from other side of a bilaterally symmetrical object where present
mirrorfill1 Fill missing landmarks for a single specimen using mirrored values from other side of object
plotSpecimens Plot an array of specimen landmark data in an interactive 3D frame
procrustes Conducts Procrustes superimposition to align 3D shapes with or without scaling to centroid size.