webP2proc {pagoda2}

Generate a 'pagoda2' web object

Description

Generate a 'pagoda2' web object

Usage

webP2proc(
  p2,
  additionalMetadata = NULL,
  title = "Pagoda2",
  make.go.sets = TRUE,
  make.de.sets = TRUE,
  go.env = NULL,
  make.gene.graph = TRUE,
  appmetadata = NULL
)

Arguments

p2

a 'Pagoda2' object

additionalMetadata

'pagoda2' web metadata object (default=NULL)

title

character string Title for the web app (default='Pagoda2')

make.go.sets

boolean Whether GO sets should be made (default=TRUE)

make.de.sets

boolean Whether differential expression sets should be made (default=TRUE)

go.env

the GO environment used for the overdispersion analysis (default=NULL)

make.gene.graph

logical specifying if the gene graph should be make, if FALSE the find similar genes functionality will be disabled on the web app

appmetadata

'pagoda2' web application metadata (default=NULL)

Value

a 'pagoda2' web application