compareClusterings {pagoda2}

Compare two different clusterings provided as factors by plotting a normalised heatmap

Description

Compare two different clusterings provided as factors by plotting a normalised heatmap

Usage

compareClusterings(cl1, cl2, filename = NA)

Arguments

cl1

clustering 1, a named factor

cl2

clustering 2, a named factor

filename

an optional filename to save the plot instead of displaying it, will be passed to pheatmap (default=NA)

Value

invisible summary table that gets plotted