opal.table_get {opalr} | R Documentation |
Get a Opal table as a tibble
Description
Shortcut function to assign a Opal table to a tibble in the R server-side session and then retrieve it into the R client-side session. Requires to have the permission to see the individual values of the table and to perform R assignments.
Usage
opal.table_get(
opal,
project,
table,
id.name = "id",
variables = NULL,
missings = TRUE
)
Arguments
opal |
Opal connection object. |
project |
Project name where the table is located. |
table |
Table name from which the tibble should be extracted. |
id.name |
The name of the column representing the entity identifiers. Default is 'id'. Requires Opal 4.0+. |
variables |
(Deprecated) List of variable names or Javascript expression that selects the variables of a table (ignored if value does not refer to a table). See javascript documentation: http://wiki.obiba.org/display/OPALDOC/Variable+Methods |
missings |
(Deprecated) Include the missing values (default is TRUE). |
See Also
Other table functions:
opal.perms()
,
opal.resource_view_create()
,
opal.resource_view_reconnect()
,
opal.table_create()
,
opal.table_delete()
,
opal.table_dictionary_get()
,
opal.table_dictionary_update()
,
opal.table_exists()
,
opal.table_export()
,
opal.table_import()
,
opal.table_perm_add()
,
opal.table_perm_delete()
,
opal.table_perm()
,
opal.table_save()
,
opal.table_truncate()
,
opal.table_view_create()
,
opal.table_view_update()
Examples
## Not run:
o <- opal.login('administrator','password', url='https://opal-demo.obiba.org')
cqx <- opal.table_get(o, "CPTP", "Cag_coreqx")
opal.logout(o)
## End(Not run)