get_rough_state_cols {ontophylo}

Multiple character state colors

Description

Get state colors for ploting stochastic character maps when there many states.

Usage

get_rough_state_cols(tree)

Arguments

tree

simmap object.

Value

A character vector with colors associated with state names.

Author(s)

Sergei Tarasov

Examples

data("hym_stm_amalg")
# Get one sample of stochastic map from head.
tree <- hym_stm_amalg$head[[5]]
# Plot one amalgamated stochastic map from head.
phytools::plotSimmap(tree, get_rough_state_cols(tree), 
lwd = 3, pts = FALSE,ftype = "off")