annotation_grid {ontologyPlot} | R Documentation |
Get logical matrix of term annotation for group of cases
Description
Get logical matrix of term annotation for group of cases
Usage
annotation_grid(
ontology,
term_sets,
all_terms = grid_terms(ontology, term_sets),
remove_unanimous = FALSE,
cluster_rows = TRUE,
cluster_cols = TRUE
)
Arguments
ontology |
|
term_sets |
List of character vectors of ontological term IDs |
all_terms |
Character vector giving terms to use in annotation. |
remove_unanimous |
Logical value determining whether to remove terms present in all |
cluster_rows |
Logical value rows determining whether to use hclust to cluster |
cluster_cols |
Logical value rows determining whether to use hclust to cluster terms (based on correlation of inclusion in |
Value
Logical matrix.
[Package ontologyPlot version 1.7 Index]