vcf_example_out {onemap}

Data generated from VCF file with biallelic markers from a full-sib family derived from two outbred parents

Description

Simulated biallelic data set for an outcross, i.e., an F1 population obtained by crossing two non-homozygous parents.

Usage

data(vcf_example_out)

Format

An object of class onemap.

Details

A total of 92 F1 individuals were genotyped with 27 markers. The data was generated from a VCF file. It contains chromossome and position informations for each marker. It is included to be used as a reference in order to understand how to convert VCF file to OneMap input data. Also, it is used for the analysis in the tutorial that comes with OneMap.

Author(s)

Cristiane Hayumi Taniguti, [e-mail]

See Also

read_onemap for details about objects of class onemap.

Examples

data(vcf_example_out)

# plot markers informations
plot(vcf_example_out)