cpma {omics}R Documentation

Cross Phenotype Meta-Analysis

Description

Performs (signed) cross phenotype meta-analysis.

Usage

    cpma(ps)

Arguments

ps

a (non-empty) numeric vector of pp-values.

Value

A list with class htest containing the following components:

statistic

the value of the χ2\chi^2 test statistic.

parameter

the estimated rate λ\lambda.

p.value

the pp-value for the test.

method

a character string indicating the type of test performed.

data.name

a character string giving the name of the data.

References

Cotsapas, C., et al. 2011 Pervasive Sharing of Genetic Effects in Autoimmune Disease. PLOS Genetics 7(8):e1002254.


[Package omics version 0.1-5 Index]