glzcs {octopucs}

Support for Groups and Subgroups in the Generalized Dendrogram

Description

Generates three metrics of support for the observed clusters at all hierarchical levels

Usage

glzcs(GRPs=GRPs, M2=M2)

Arguments

GRPs

List object generated by the functions IDscluster & IDscluster2

M2

Class list object generated by the functions glzcluster or glzcluster2

Value

A table with supporting values and size of every group: integrity, contamination, probability and group size.

Author(s)

Roger Guevara ([e-mail]) & Ian MacGregor-Fors ([e-mail])

References

Koleff, P., Gaston, K.J., Lennon, J. J. 2003. Measuring beta diversity for presence-absence data. Journal of Animal Ecology 71:367. https://doi.org/10.1046/j.1365-2656.2003.00710.x

Examples

data(dune)
OCT <- glzcluster(dune, n=100)
GRP <- IDscluster(OCT)
SUP <- glzcs(GRP, OCT)
SUP