numberAsPOSIXct {oce}

Convert a Numeric Time to a POSIXct Time

Description

This converts numerical values into POSIXct times. There are many schemes for doing this, with the type parameter being used to select between them. See “Details” for a listing, broken down by scheme.

Usage

numberAsPOSIXct(t, type = "unix", tz = "UTC", leap = TRUE)

Arguments

t

an integer corresponding to a time, in a way that depends on type.

type

character value indicating the time type. The permitted values are "argo", "epic", "excel", "gps", "matlab", "ncep1", "ncep2", "sas", "spss", "unix", and "yearday", the first of these being the default.

tz

a string indicating the time zone, by default "UTC".

leap

a logical value, TRUE by default, that applies only if type is "gps". If leap is TRUE, then the built-in dataset named .leap.seconds is consulted to find of the number of leap seconds between 1980 (when the GPS program started) and the time computed from the other parameters, and the return value is decreased accordingly (see Example 3).

Details

The possible choices for type are as listed below.

• "unix" handles Unix times, measured in seconds since the start of the year 1970.

• "matlab" handles Matlab times, measured in days since what MathWorks (reference 1) calls “January 0, 0000” (i.e. ISOdatetime(0, 1, 1, 0, 0, 0) in R notation).

• "gps" handles the Global Positioning System convention. The scheme is complicated, owing to hardware limitations of GPS satellites. As illustrated in Example 3, t may be a matrix with either 2 or 3 columns. In the 2-column format, the first column holds the number of weeks after 1999-08-22, modulo 1024 (approximately 19.6 years), and the second column (here and also in the 3-column format) holds the number of seconds in the referenced week, with leap seconds being handled with the leap parameter. The modulo calculation is required because GPS satellites dedicate only 10 bits to the week number. The resultant ambiguity (e.g. a rollover in 2019-04-07) is addressed in the 3-column format, in which the last column holds the number of 1024-week rollover events since 1980-01-06. Users should set this column to 0 for times prior to 1999-08-22, to 1 for later times prior to 2019-04-07, to 2 for later times prior to 2038-11-21, etc. However, there will be an exception to this rule, when satellites start dedicating 12 bits to the week value. For such data, the third column will need to be 0 for all times prior to 2137-01-06.

• "argo" handles Argo times, measured in days since the start of the year 1900.

• "excel" handles Excel times, measured in days since the start of the year 1900. (Note that excel incorrectly regards 1900 as a leap year, so 1 day is subtracted from t unless the time is less than or equal to 1900 Feb 28. Note that NA is returned for the day 60, which is what excel codes for "Feb 29, 1900", the non-existing day that excel accepts.

• "ncep1" handles NCEP times, measured in hours since the start of the year 1800.

• "ncep2" handles NCEP times, measured in days since the start of the year 1. (Note that, for reasons that are unknown at this time, a simple R expression of this definition is out by two days compared with the UDUNITS library, which is used by NCEP. Therefore, a two-day offset is applied. See references 2 and 3.)

• "sas" handles SAS times, indicated by type="sas", have origin at the start of 1960.

• "spss" handles SPSS times, in seconds after 1582-10-14.

• "yearday" handles a convention in which t is a two-column matrix, with the first column being the year, and the second the yearday (starting at 1 for the first second of January 1, to match the convention used by Sea-Bird CTD software).

• "epic" handles a convention used in the EPIC software library, from the Pacific Marine Environmental Laboratory, in which t is a two-column matrix, with the first column being the julian Day (as defined in julianDay(), for example), and with the second column being the millisecond within that day. See reference 4.

• "vms" handles a convention used in the VMS operating system and for Modified Julian Day, in which t is the number of seconds past 1859-11-17T00:00:00 UTC. See reference 5.

Value

A POSIXct() time vector.

Author(s)

Dan Kelley

References

1. Matlab times: ⁠https://www.mathworks.com/help/matlab/ref/datenum.html⁠

2. NCEP times: ⁠https://psl.noaa.gov/data/gridded/faq.html⁠

3. Problem with NCEP times: ⁠https://github.com/dankelley/oce/issues/738⁠

4. EPIC times: software and manuals at ⁠https://www.pmel.noaa.gov/epic/download/index.html#epslib⁠; see also Denbo, Donald W., and Nancy N. Soreide. “EPIC.” Oceanography 9 (1996). doi:10.5670/oceanog.1996.10

5. VMS times: https://en.wikipedia.org/wiki/Epoch_(computing)

6. GPS times: https://www.labsat.co.uk/index.php/en/gps-time-calculator

See Also

Other things related to time: ctimeToSeconds(), julianCenturyAnomaly(), julianDay(), numberAsHMS(), secondsToCtime(), unabbreviateYear()

Other things related to time: ctimeToSeconds(), julianCenturyAnomaly(), julianDay(), numberAsHMS(), secondsToCtime(), unabbreviateYear()

Examples

# Example 1. default (unix)
numberAsPOSIXct(0)

# Example 2. Matlab
numberAsPOSIXct(1, type = "matlab")

# Example 3. GPS with default week rollover or with no rollover (Canada Day, year 2010)
numberAsPOSIXct(cbind(566, 345615), type = "gps")
numberAsPOSIXct(cbind(566, 345615, 1), type = "gps")
numberAsPOSIXct(cbind(1024 + 566, 345615, 0), type = "gps")
# Show how to deal with leap seconds (15 of them, in this case)
sum(as.POSIXct("1980-01-01") < .leap.seconds & .leap.seconds <= as.POSIXct("2010-07-01"))
-15 + numberAsPOSIXct(cbind(1024 + 566, 345615, 0), type = "gps", leap = FALSE)

# Example 4. yearday
numberAsPOSIXct(cbind(2013, 1), type = "yearday") # start of 2013

# Example 5. Epic time, one hour into Canada Day of year 2018. In computing the
# Julian day, note that this starts at noon.
jd <- julianDay(as.POSIXct("2018-07-01 12:00:00", tz = "UTC"))
numberAsPOSIXct(cbind(jd, 1e3 * 1 * 3600), type = "epic", tz = "UTC")

# Example 6. Julian day, note that this starts at noon.
jd <- julianDay(as.POSIXct("2018-07-01 12:00:00", tz = "UTC"))
numberAsPOSIXct(cbind(jd, 1e3 * 1 * 3600), type = "epic", tz = "UTC")