nonmemica-package |
Create and Evaluate NONMEM Models in a Project Context |
absolute |
Check if File Path is Absolute |
as.best.default |
Convert Vector to Best of Numeric or Character |
as.bootstrap.bootstrap |
Create Bootstrap from Bootstrap |
as.halfmatrix.default |
Coerce to Half Matrix by Default |
as.init.init |
Coerce init to init |
as.inits.list |
Coerce list to inits |
as.matrix.halfmatrix |
Coerce Half Matrix to Matrix |
as.model.character |
Coerce character to model |
as.xml_document |
Create an xml_document in a Project Context |
as.xml_document.character |
Create xml_document From Character |
as.xml_document.xml_document |
Create an xml_document in a Project Context |
as_nms_canonical |
Coerce to 'nms_canonical' |
as_nms_nonmem |
Coerce to 'nms_nonmem' |
as_nms_pmx |
Coerce to 'nms_pmx' |
as_nms_psn |
Coerce to 'nms_psn' |
comments.inits |
Extract Comments from Inits |
comments.items |
Extract Comments from Items |
comments.model |
Extract Comments from Model |
contains |
Check Whether Text Contains Pattern |
datafile.character |
Identify the Datafile for a Model |
definitions |
Harvest Model Item Definitions |
definitions.character |
Harvest Model Item Definitions |
definitions.definitions |
Create Model Item Definitions from definitions |
depends.default |
Identify Model Dependencies |
errors.character |
Get Errors for Character |
estimates.character |
Get Estimates for Character |
fixed.init |
Check if init is fixed |
fixed.model |
Check If Model is Fixed |
generalize |
Generalize a Nonmissing Value |
ignored |
Extract Index for Ignored Records |
initial.model |
Get Model Initial Estimates |
initial<-.model |
Set Upper Bounds for Model Initial Estimates |
likebut |
Modify a Model |
lower.model |
Get Lower Bounds for Model Initial Estimates |
lower<-.model |
Set Lower Bounds for Model Initial Estimates |
meta.character |
Get Metadata for Character |
metaplot.character |
Metaplot Character |
metaplot_character |
Metaplot Character, Standard Evaluation |
metasuperset |
Retrieve Model Outputs with Metadata |
modeldir |
Identify the Directory for a Model |
modelfile |
Identify the Modelfile for a Model |
modelpath |
Resolve A Path to a Model-related File |
modelpath.character |
Resolve A Path to a Model-related File for Character |
ninput |
Calculate Number of Inputs |
ninput.character |
Calculate Number of Inputs for Character |
ninput.numeric |
Calculate Number of Inputs for Numeric |
nms |
Translate Parameter Names |
nms_canonical.character |
Generate Canonical Names for Character |
nms_canonical.model |
Generate Canonical Names for Model |
nms_canonical.nms_nonmem |
Convert NONMEM Parameter Names to Canonical |
nms_nonmem.character |
Generate NONMEM Names for Character |
nms_nonmem.model |
Generate NONMEM Names for Model |
nms_nonmem.nms_canonical |
Convert Canonical Parameter Names to NONMEM |
nms_nonmem.nms_pmx |
Convert pmxTools Names to NONMEM |
nms_pmx.nms_canonical |
Convert Canonical Names to pmxTools |
nms_pmx.nms_nonmem |
Convert NONMEM Names to pmxTools |
nms_psn.character |
Generate PsN-style Names for Character |
nms_psn.model |
Generate PsN-style Names for Model |
nonmemica |
Create and Evaluate NONMEM Models in a Project Context |
offdiag.halfmatrix |
Isolate Off-diagonal of Half Matrix |
parameters.character |
Get Parameters for Character |
partab |
Create Parameter Table |
partab.character |
Create a Parameter Table from Model Name |
partab.partab |
Create Parameter Table |
problem.character |
Identify the Model Problem Statement for Character |
psn_nested |
PsN Model File is Nested |
psn_options |
Set PsN Options |
relativizePath |
Relativize a Path |
resolve |
Resolve File Path |
rosetta |
Translate Parameter Names |
runlog.character |
Create a Runlog for Character |
safe_join |
Join Data Safely |
safe_join.data.frame |
Join Data Frames Safely |
shuffle |
Move the Columns of a Data Frame Relative to Each Other |
specfile.character |
Identify the Data Specification File for a Model |
superset.character |
Coerce to Superset from Character |
superspec |
Create Specification for Model Inputs and Outputs |
superspec.character |
Create Specification for Model Inputs and Outputs From Character |
superspec.numeric |
Create Specification for Model Inputs and Outputs From Numeric |
tad |
Calculate Time Since Most Recent Dose |
tad1 |
A NONMEM-like Dataset |
tod |
Calculate Time of Most Recent Dose |
tweak.default |
Tweak a Model by Default |
tweak.model |
Tweak Model |
updated.character |
Create the Updated Version of Character |
upper.model |
Get Upper Bounds for Model Initial Estimates |
upper<-.model |
Set Upper Bounds for Model Initial Estimates |
xpath |
Evaluate Xpath Expression |
xpath.default |
Evaluate xpath Expression in Default Context |
xpath.xml_document |
Evaluate xpath Expression in Document Context |