Hamiltonian Monte Carlo and Other Gradient-Based MCMC Sampling Algorithms for 'nimble'

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Documentation for package ‘nimbleHMC’ version 0.2.2

• DESCRIPTION file.
• Package NEWS.

Help Pages

addHMC	Add HMC sampler
buildHMC	Build HMC
configureHMC	Configure HMC
HMC	No-U-Turn (NUTS) Hamiltonian Monte Carlo (HMC) Sampler
hmc	No-U-Turn (NUTS) Hamiltonian Monte Carlo (HMC) Sampler
nimbleHMC	Builds and executes NIMBLE's HMC sampler
NUTS	No-U-Turn (NUTS) Hamiltonian Monte Carlo (HMC) Sampler
nuts	No-U-Turn (NUTS) Hamiltonian Monte Carlo (HMC) Sampler
NUTS-classic	Classic No-U-Turn (NUTS_classic) Hamiltonian Monte Carlo (HMC) Sampler
nuts-classic	Classic No-U-Turn (NUTS_classic) Hamiltonian Monte Carlo (HMC) Sampler
NUTS_classic	Classic No-U-Turn (NUTS_classic) Hamiltonian Monte Carlo (HMC) Sampler
nuts_classic	Classic No-U-Turn (NUTS_classic) Hamiltonian Monte Carlo (HMC) Sampler
sampler_NUTS	No-U-Turn (NUTS) Hamiltonian Monte Carlo (HMC) Sampler
sampler_NUTS_classic	Classic No-U-Turn (NUTS_classic) Hamiltonian Monte Carlo (HMC) Sampler
stateNL_NUTS	nimbleList definition used internally in NUTS sampler.
treebranchNL_NUTS	nimbleList definition used internally in NUTS sampler.