plot_nidps {neuroimaGene}

NIDP summary plot of NeuroimaGene object

Description

Generate overview plot of the neuroimagene object according to nidps

Usage

plot_nidps(ng_obj, maxNidps = 30, title = NA, verbose = FALSE)

Arguments

ng_obj

NeuroimaGene Object

maxNidps

maximum number of NIDPs to visualize. default=30

title

optional title tag for the plot

verbose

print runtime messages to R console. Default to FALSE

Value

a ggplot class object detailing mean effect size magnitude per NIDP, colored by brain region

Examples

gene_list <- c('TRIM35', 'PROSER3', 'EXOSC6', 'PICK1', 'UPK1A', 'ESPNL', 'ZIC4')
ng <- neuroimaGene(gene_list, atlas = NA, mtc = 'BH', vignette = TRUE)
plot_nidps(ng)