plot_gnNIDP {neuroimaGene}

Gene by NIDP summary plot of neuroimaGene object

Description

Generate overview plot of the neuroimagene object according to gene/NIDP pair

Usage

plot_gnNIDP(ng_obj, maxNidps = 20, maxGns = 15, title = NA, verbose = FALSE)

Arguments

ng_obj

NeuroimaGene object

maxNidps

maximum number of NIDPs to visualize. default=20

maxGns

maximum number of genes to visualize. default=15

title

optional title tag for the plot

verbose

print runtime messages to R console. Default to FALSE

Value

a ggplot class heatmap showing tissue models per NIDP/Gene pair

Examples

gene_list <- c('TRIM35', 'PROSER3', 'EXOSC6', 'PICK1', 'UPK1A', 'ESPNL', 'ZIC4')
ng <- neuroimaGene(gene_list, atlas = NA, mtc = 'BH', vignette = TRUE)
plot_gnNIDP(ng)