NETwork COMparison Inference

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Documentation for package ‘netcom’ version 2.1.7

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

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align	Network Alignment
best_fit_optim	Empirical parameterization
classify	Mechanistic Network Classification
classify_Systematic	Mechanistic Network Classification
compare	Compare Networks Many-to-Many
compare_Target	Compare Networks One-to-Many
gini	Gini coefficient
grow_DD	Grow a Duplication and Divergence Network
grow_DM	Grow a Duplication and Mutation Network
grow_ER	Grow an Erdos-Renyi Random Network
grow_NM	Grow a Niche Model Network
grow_PA	Grow a Preferential Attachment Network
grow_SW	Grow a Small-World Network
ics	Induced Conserved Structure (ICS)
make_DD	Makes a Duplication and Divergence Network
make_DM	Make a Duplication and Mutation Network
make_Mixture	Make a Mixture Mechanism Network
make_NM	Make a Niche Model network
make_Null	Mechanism Null Distributions
make_Null_canonical	Mechanism Null Distributions
make_Null_mixture	Mechanism Null Distributions
make_SW	Makes a Small-World Network
make_Systematic	Systematically Make Networks
make_Systematic_canonical	Systematically Make Networks
make_Systematic_directedCanonicalLike	Systematically Make Networks
make_Systematic_mixture	Systematically Make Networks
null_fit_optim	Empirical parameterization via null distributions
stir_DD	Sitrs a Duplication and Divergence Network
stir_DM	Stirs a Duplication and Mutation Network
stir_ER	Stir an Erdos-Renyi Random Network
stir_NM	Stirs a Niche Model Network
stir_PA	Stirs a Preferential Attachment Network
stir_SW	Stirs a Small-World Network