plot_mx_proportions {mxnorm} | R Documentation |
Visualize variance proportions by marker and table
Description
Visualize variance proportions by marker and table
Usage
plot_mx_proportions(mx_data)
Arguments
mx_data |
|
Value
ggplot2
object with proportions plot
Examples
mx_data = mx_dataset(mxnorm::mx_sample, "slide_id", "image_id",
c("marker1_vals","marker2_vals","marker3_vals"),
c("metadata1_vals"))
mx_data = mx_normalize(mx_data, transform="log10",method="None")
mx_data = run_var_proportions(mx_data, table="both")
plot_mx_proportions(mx_data)
[Package mxnorm version 1.0.3 Index]