simulated_data {mvMAPIT}

Genotype and trait data with epistasis.

Description

A simulated dataset that has epistatic interactions.

Usage

simulated_data

Format

A named list with simulated data and simulation parameters:

parameters

Tibble containing simulation parameters for each trait.

trait

Matrix containing simulated data for 2 traits and 500 samples.

genotype

Matrix containing simulated genotype with 500 samples and 1000 variables.

additive

Tibble containing all variants with additive effects on the traits as well as the effect sizes.

epistatic

Tibble containing all variants with epistatic effects on the traits as well as the effect sizes.

interactions

Tibble containing all interactions, effect size, and trait they affect.

snps.filtered

SNPs that were used in the simulations.

Source

data-raw/simulate_epistasis.R