Metabolite Set Enrichment Analysis for Loadings
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Documentation for package ‘mseapca’ version 2.0.3
Help Pages
| csv2list | Convert metabolite set / csv to list |
| list2xml | Save compound set as XML file |
| msea_ora | MSEA by over representation analysis |
| msea_sub | MSEA by Subramanian et al. |
| pathbank2list | Generate metabolite set list from PathBank database |
| pathway | Example dataset for fasting and covid19 datasets |
| read_pathway | Read metabolite set file (*.xml) |
| setlabel | Generate binary label matrix of metabolite set |
| ssea_ora | Single sample enrichment analysis by over representation analysis |