DoData {mrMLM} | R Documentation |
process raw data
Description
process raw data for later use
Usage
DoData(genRaw,Genformat,pheRaw1q,kkRaw,psmatrixRaw,covmatrixRaw,trait,
type,PopStrType)
Arguments
genRaw |
raw genotype matrix. |
Genformat |
genotype format. |
pheRaw1q |
raw phenotype matrix. |
kkRaw |
raw kinship matrix. |
psmatrixRaw |
raw population structure matrix. |
covmatrixRaw |
raw covariate matrix. |
trait |
which trait to analysis. |
type |
which type to transform. |
PopStrType |
The type of population structure. |
Author(s)
Zhang Ya-Wen, Wang Jing-Tian, Li Pei, Zhang Yuan-Ming
Maintainer: Yuan-Ming Zhang<soyzhang@mail.hzau.edu.cn>
Examples
G1=data(Gen)
P1=data(Phe)
readraw=ReadData(fileGen=Gen,filePhe=Phe,fileKin=NULL,filePS =NULL,
fileCov=NULL,Genformat=1)
result=DoData(readraw$genRaw,Genformat=1,readraw$pheRaw1q,readraw$kkRaw,
readraw$psmatrixRaw,readraw$covmatrixRaw,trait=1,type=2,PopStrType=NULL)
[Package mrMLM version 5.0.1 Index]